Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.81□□□□□ -0.52
Nkx2-1P50220 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Gm11780-201ENSMUST00000136880 516 ntBASIC11.81□□□□□ -0.52
Nkx2-1P50220 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.81□□□□□ -0.52
Nkx2-1P50220 Gm34391-201ENSMUST00000203706 907 ntBASIC11.81□□□□□ -0.52
Nkx2-1P50220 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.81□□□□□ -0.52
Nkx2-1P50220 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-1P50220 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gm13464-201ENSMUST00000119418 935 ntBASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gm9682-201ENSMUST00000197505 556 ntBASIC11.8□□□□□ -0.52
Nkx2-1P50220 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Rps4l-201ENSMUST00000071745 943 ntBASIC11.8□□□□□ -0.52
Nkx2-1P50220 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.8□□□□□ -0.52
Nkx2-1P50220 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-1P50220 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms