Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Brca1P48754 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.7■□□□□ 0.1
Brca1P48754 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.7■□□□□ 0.1
Brca1P48754 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Brca1P48754 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.7■□□□□ 0.1
Brca1P48754 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.7■□□□□ 0.1
Brca1P48754 Gm2383-201ENSMUST00000181461 807 ntBASIC15.7■□□□□ 0.1
Brca1P48754 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.7■□□□□ 0.1
Brca1P48754 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.7■□□□□ 0.1
Brca1P48754 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.7■□□□□ 0.1
Brca1P48754 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.7■□□□□ 0.1
Brca1P48754 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Brca1P48754 Gm5161-201ENSMUST00000075243 853 ntBASIC15.7■□□□□ 0.1
Brca1P48754 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Brca1P48754 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.7■□□□□ 0.1
Brca1P48754 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.7■□□□□ 0.1
Brca1P48754 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Brca1P48754 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Brca1P48754 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Gm5687-201ENSMUST00000118252 640 ntBASIC15.69■□□□□ 0.1
Brca1P48754 Gm13786-201ENSMUST00000122371 333 ntBASIC15.69■□□□□ 0.1
Brca1P48754 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Brca1P48754 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Brca1P48754 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Brca1P48754 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Snora73a-201ENSMUST00000082453 205 ntBASIC15.69■□□□□ 0.1
Brca1P48754 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.69■□□□□ 0.1
Brca1P48754 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.69■□□□□ 0.1
Brca1P48754 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Brca1P48754 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Brca1P48754 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.68■□□□□ 0.1
Brca1P48754 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.68■□□□□ 0.1
Brca1P48754 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Brca1P48754 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.68■□□□□ 0.1
Brca1P48754 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
Brca1P48754 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Brca1P48754 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Brca1P48754 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.68■□□□□ 0.1
Brca1P48754 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.68■□□□□ 0.1
Brca1P48754 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.68■□□□□ 0.1
Brca1P48754 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.68■□□□□ 0.1
Brca1P48754 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.68■□□□□ 0.1
Brca1P48754 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.68■□□□□ 0.1
Brca1P48754 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.68■□□□□ 0.1
Brca1P48754 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Brca1P48754 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brca1P48754 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Brca1P48754 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca1P48754 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca1P48754 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca1P48754 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca1P48754 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brca1P48754 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Brca1P48754 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Brca1P48754 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.67■□□□□ 0.1
Brca1P48754 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.67■□□□□ 0.1
Brca1P48754 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms