Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
GdnfP48540 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
GdnfP48540 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.5□□□□□ -0.41
GdnfP48540 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.49□□□□□ -0.41
GdnfP48540 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
GdnfP48540 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
GdnfP48540 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
GdnfP48540 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.49□□□□□ -0.41
GdnfP48540 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
GdnfP48540 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
GdnfP48540 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
GdnfP48540 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.49□□□□□ -0.41
GdnfP48540 Gm14140-201ENSMUST00000119999 995 ntBASIC12.49□□□□□ -0.41
GdnfP48540 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.49□□□□□ -0.41
GdnfP48540 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.49□□□□□ -0.41
GdnfP48540 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GdnfP48540 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.48□□□□□ -0.41
GdnfP48540 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.48□□□□□ -0.41
GdnfP48540 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
GdnfP48540 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
GdnfP48540 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
GdnfP48540 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GdnfP48540 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.47□□□□□ -0.41
GdnfP48540 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GdnfP48540 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms