Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.88□□□□□ -0.35
Rfx3P48381 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.88□□□□□ -0.35
Rfx3P48381 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.88□□□□□ -0.35
Rfx3P48381 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.88□□□□□ -0.35
Rfx3P48381 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rfx3P48381 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.88□□□□□ -0.35
Rfx3P48381 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.88□□□□□ -0.35
Rfx3P48381 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rfx3P48381 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Rfx3P48381 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.88□□□□□ -0.35
Rfx3P48381 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.87□□□□□ -0.35
Rfx3P48381 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rfx3P48381 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.87□□□□□ -0.35
Rfx3P48381 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rfx3P48381 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rfx3P48381 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Rfx3P48381 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.87□□□□□ -0.35
Rfx3P48381 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rfx3P48381 Gm37935-201ENSMUST00000192012 982 ntBASIC12.87□□□□□ -0.35
Rfx3P48381 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rfx3P48381 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.87□□□□□ -0.35
Rfx3P48381 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rfx3P48381 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rfx3P48381 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.87□□□□□ -0.35
Rfx3P48381 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Rfx3P48381 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfx3P48381 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.87□□□□□ -0.35
Rfx3P48381 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.87□□□□□ -0.35
Rfx3P48381 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfx3P48381 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
Rfx3P48381 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.86□□□□□ -0.35
Rfx3P48381 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.86□□□□□ -0.35
Rfx3P48381 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms