Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox18P43680 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.68□□□□□ -0.22
Sox18P43680 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox18P43680 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox18P43680 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.67□□□□□ -0.22
Sox18P43680 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox18P43680 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox18P43680 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox18P43680 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Sox18P43680 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox18P43680 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.67□□□□□ -0.22
Sox18P43680 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox18P43680 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox18P43680 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Sox18P43680 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Sox18P43680 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox18P43680 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox18P43680 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Gm15393-201ENSMUST00000120499 219 ntBASIC13.66□□□□□ -0.22
Sox18P43680 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.66□□□□□ -0.22
Sox18P43680 Gm18307-201ENSMUST00000206864 949 ntBASIC13.66□□□□□ -0.22
Sox18P43680 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.66□□□□□ -0.22
Sox18P43680 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox18P43680 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sox18P43680 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox18P43680 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sox18P43680 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Gm14542-201ENSMUST00000118460 1248 ntBASIC13.65□□□□□ -0.22
Sox18P43680 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.65□□□□□ -0.22
Sox18P43680 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Gm27731-201ENSMUST00000185192 107 ntBASIC13.65□□□□□ -0.22
Sox18P43680 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.65□□□□□ -0.22
Sox18P43680 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms