Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfsf4P43488 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.75□□□□□ -0.21
Tnfsf4P43488 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.75□□□□□ -0.21
Tnfsf4P43488 Gm7461-201ENSMUST00000058918 827 ntBASIC13.75□□□□□ -0.21
Tnfsf4P43488 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf4P43488 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.74□□□□□ -0.21
Tnfsf4P43488 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms