Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HttP42859 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.84□□□□□ -0.03
HttP42859 Gm13316-201ENSMUST00000140537 691 ntBASIC14.84□□□□□ -0.03
HttP42859 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.84□□□□□ -0.03
HttP42859 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.84□□□□□ -0.03
HttP42859 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.84□□□□□ -0.03
HttP42859 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HttP42859 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.84□□□□□ -0.03
HttP42859 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HttP42859 Efs-202ENSMUST00000227037 2540 ntBASIC14.84□□□□□ -0.03
HttP42859 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.84□□□□□ -0.03
HttP42859 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.84□□□□□ -0.03
HttP42859 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HttP42859 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.84□□□□□ -0.03
HttP42859 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HttP42859 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HttP42859 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HttP42859 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
HttP42859 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.03
HttP42859 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Gm24420-201ENSMUST00000176676 59 ntBASIC14.83□□□□□ -0.03
HttP42859 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
HttP42859 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HttP42859 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HttP42859 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 Gm7809-201ENSMUST00000153199 742 ntBASIC14.83□□□□□ -0.04
HttP42859 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.83□□□□□ -0.04
HttP42859 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 Gm13813-201ENSMUST00000120998 787 ntBASIC14.83□□□□□ -0.04
HttP42859 Gm9550-201ENSMUST00000161130 862 ntBASIC14.83□□□□□ -0.04
HttP42859 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.83□□□□□ -0.04
HttP42859 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HttP42859 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.82□□□□□ -0.04
HttP42859 AA914427-201ENSMUST00000193194 1166 ntBASIC14.82□□□□□ -0.04
HttP42859 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.82□□□□□ -0.04
HttP42859 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.82□□□□□ -0.04
HttP42859 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.82□□□□□ -0.04
HttP42859 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HttP42859 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.82□□□□□ -0.04
HttP42859 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.82□□□□□ -0.04
HttP42859 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HttP42859 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HttP42859 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.81□□□□□ -0.04
HttP42859 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HttP42859 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
HttP42859 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.81□□□□□ -0.04
HttP42859 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Mospd4-201ENSMUST00000180618 576 ntBASIC14.81□□□□□ -0.04
HttP42859 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HttP42859 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms