Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Gm7222-201ENSMUST00000117512 906 ntBASIC14.35□□□□□ -0.11
Fen1P39749 Gm15173-201ENSMUST00000122049 433 ntBASIC14.35□□□□□ -0.11
Fen1P39749 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Fen1P39749 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.35□□□□□ -0.11
Fen1P39749 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.35□□□□□ -0.11
Fen1P39749 Gm45167-201ENSMUST00000208007 322 ntBASIC14.35□□□□□ -0.11
Fen1P39749 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.35□□□□□ -0.11
Fen1P39749 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.35□□□□□ -0.11
Fen1P39749 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.35□□□□□ -0.11
Fen1P39749 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Fen1P39749 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.35□□□□□ -0.11
Fen1P39749 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.35□□□□□ -0.11
Fen1P39749 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.34□□□□□ -0.11
Fen1P39749 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.34□□□□□ -0.11
Fen1P39749 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Fen1P39749 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Fen1P39749 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fen1P39749 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.34□□□□□ -0.11
Fen1P39749 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Fen1P39749 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fen1P39749 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fen1P39749 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.34□□□□□ -0.11
Fen1P39749 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fen1P39749 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.33□□□□□ -0.11
Fen1P39749 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fen1P39749 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fen1P39749 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fen1P39749 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fen1P39749 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Fen1P39749 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Fen1P39749 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fen1P39749 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Fen1P39749 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.33□□□□□ -0.12
Fen1P39749 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.33□□□□□ -0.12
Fen1P39749 Gm18206-201ENSMUST00000207027 926 ntBASIC14.33□□□□□ -0.12
Fen1P39749 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.33□□□□□ -0.12
Fen1P39749 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.33□□□□□ -0.12
Fen1P39749 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.33□□□□□ -0.12
Fen1P39749 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Fen1P39749 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fen1P39749 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms