Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Upk2P38575 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.51□□□□□ -0.41
Upk2P38575 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upk2P38575 Gm6222-201ENSMUST00000120787 396 ntBASIC12.5□□□□□ -0.41
Upk2P38575 Gm14822-201ENSMUST00000122247 291 ntBASIC12.5□□□□□ -0.41
Upk2P38575 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk2P38575 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.5□□□□□ -0.41
Upk2P38575 Gm44608-201ENSMUST00000206827 855 ntBASIC12.5□□□□□ -0.41
Upk2P38575 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.5□□□□□ -0.41
Upk2P38575 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.5□□□□□ -0.41
Upk2P38575 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Upk2P38575 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk2P38575 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upk2P38575 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upk2P38575 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Upk2P38575 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk2P38575 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upk2P38575 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upk2P38575 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.49□□□□□ -0.41
Upk2P38575 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.49□□□□□ -0.41
Upk2P38575 Gm13823-201ENSMUST00000119930 345 ntBASIC12.49□□□□□ -0.41
Upk2P38575 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 AA619741-201ENSMUST00000195095 646 ntBASIC12.49□□□□□ -0.41
Upk2P38575 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Gm43474-201ENSMUST00000196415 774 ntBASIC12.49□□□□□ -0.41
Upk2P38575 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.49□□□□□ -0.41
Upk2P38575 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Upk2P38575 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upk2P38575 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk2P38575 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk2P38575 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk2P38575 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk2P38575 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk2P38575 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Upk2P38575 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms