Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
LdlrP35951 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.19□□□□□ -0.14
LdlrP35951 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.19□□□□□ -0.14
LdlrP35951 Gm45612-201ENSMUST00000211320 160 ntBASIC14.19□□□□□ -0.14
LdlrP35951 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.19□□□□□ -0.14
LdlrP35951 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.19□□□□□ -0.14
LdlrP35951 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.19□□□□□ -0.14
LdlrP35951 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.19□□□□□ -0.14
LdlrP35951 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
LdlrP35951 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LdlrP35951 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.19□□□□□ -0.14
LdlrP35951 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
LdlrP35951 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.18□□□□□ -0.14
LdlrP35951 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.18□□□□□ -0.14
LdlrP35951 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.18□□□□□ -0.14
LdlrP35951 Gm13597-201ENSMUST00000121239 375 ntBASIC14.18□□□□□ -0.14
LdlrP35951 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.18□□□□□ -0.14
LdlrP35951 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.18□□□□□ -0.14
LdlrP35951 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LdlrP35951 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LdlrP35951 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.17□□□□□ -0.14
LdlrP35951 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.17□□□□□ -0.14
LdlrP35951 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LdlrP35951 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.17□□□□□ -0.14
LdlrP35951 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.17□□□□□ -0.14
LdlrP35951 Gm5312-201ENSMUST00000203728 547 ntBASIC14.17□□□□□ -0.14
LdlrP35951 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.17□□□□□ -0.14
LdlrP35951 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.17□□□□□ -0.14
LdlrP35951 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LdlrP35951 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LdlrP35951 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms