Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm2651-201ENSMUST00000203560 838 ntBASIC15.56■□□□□ 0.08
Sox5P35710 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.56■□□□□ 0.08
Sox5P35710 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.56■□□□□ 0.08
Sox5P35710 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sox5P35710 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox5P35710 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Sox5P35710 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Sox5P35710 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Sox5P35710 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.55■□□□□ 0.08
Sox5P35710 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.55■□□□□ 0.08
Sox5P35710 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.55■□□□□ 0.08
Sox5P35710 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sox5P35710 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.55■□□□□ 0.08
Sox5P35710 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox5P35710 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.55■□□□□ 0.08
Sox5P35710 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.55■□□□□ 0.08
Sox5P35710 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.55■□□□□ 0.08
Sox5P35710 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sox5P35710 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sox5P35710 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox5P35710 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox5P35710 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.54■□□□□ 0.08
Sox5P35710 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox5P35710 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox5P35710 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox5P35710 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.53■□□□□ 0.08
Sox5P35710 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.53■□□□□ 0.08
Sox5P35710 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox5P35710 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sox5P35710 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.53■□□□□ 0.08
Sox5P35710 Gm14140-201ENSMUST00000119999 995 ntBASIC15.53■□□□□ 0.08
Sox5P35710 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.53■□□□□ 0.08
Sox5P35710 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox5P35710 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox5P35710 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms