Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Foxa1P35582 Gm28630-201ENSMUST00000187806 498 ntBASIC13.19□□□□□ -0.3
Foxa1P35582 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.19□□□□□ -0.3
Foxa1P35582 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.19□□□□□ -0.3
Foxa1P35582 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.19□□□□□ -0.3
Foxa1P35582 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.19□□□□□ -0.3
Foxa1P35582 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Foxa1P35582 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Foxa1P35582 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxa1P35582 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Foxa1P35582 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Foxa1P35582 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.18□□□□□ -0.3
Foxa1P35582 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Foxa1P35582 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Foxa1P35582 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.18□□□□□ -0.3
Foxa1P35582 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Foxa1P35582 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Foxa1P35582 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Foxa1P35582 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Foxa1P35582 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.17□□□□□ -0.3
Foxa1P35582 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.17□□□□□ -0.3
Foxa1P35582 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.17□□□□□ -0.3
Foxa1P35582 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.17□□□□□ -0.3
Foxa1P35582 Gm27622-201ENSMUST00000183779 60 ntBASIC13.17□□□□□ -0.3
Foxa1P35582 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.17□□□□□ -0.3
Foxa1P35582 AA619741-201ENSMUST00000195095 646 ntBASIC13.17□□□□□ -0.3
Foxa1P35582 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.17□□□□□ -0.3
Foxa1P35582 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.17□□□□□ -0.3
Foxa1P35582 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Mir125a-201ENSMUST00000083545 68 ntBASIC13.17□□□□□ -0.3
Foxa1P35582 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Foxa1P35582 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Foxa1P35582 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 BC001981-202ENSMUST00000191393 1545 ntBASIC13.17□□□□□ -0.3
Foxa1P35582 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Foxa1P35582 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxa1P35582 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Foxa1P35582 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Foxa1P35582 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Foxa1P35582 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Foxa1P35582 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms