Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RetP35546 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RetP35546 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RetP35546 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RetP35546 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RetP35546 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RetP35546 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
RetP35546 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.36□□□□□ -0.27
RetP35546 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RetP35546 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.36□□□□□ -0.27
RetP35546 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RetP35546 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RetP35546 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.36□□□□□ -0.27
RetP35546 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RetP35546 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.36□□□□□ -0.27
RetP35546 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.36□□□□□ -0.27
RetP35546 Gm2451-201ENSMUST00000199447 999 ntBASIC13.36□□□□□ -0.27
RetP35546 Gm10290-201ENSMUST00000200451 999 ntBASIC13.36□□□□□ -0.27
RetP35546 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RetP35546 Gm7730-201ENSMUST00000212486 454 ntBASIC13.36□□□□□ -0.27
RetP35546 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.36□□□□□ -0.27
RetP35546 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RetP35546 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RetP35546 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RetP35546 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RetP35546 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RetP35546 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
RetP35546 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
RetP35546 Gm25144-201ENSMUST00000179561 110 ntBASIC13.35□□□□□ -0.27
RetP35546 Gm25352-201ENSMUST00000179815 110 ntBASIC13.35□□□□□ -0.27
RetP35546 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RetP35546 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.35□□□□□ -0.27
RetP35546 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RetP35546 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.35□□□□□ -0.27
RetP35546 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RetP35546 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
RetP35546 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RetP35546 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RetP35546 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RetP35546 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RetP35546 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.34□□□□□ -0.27
RetP35546 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RetP35546 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
RetP35546 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RetP35546 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RetP35546 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms