Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Thbs1P35441 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Thbs1P35441 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Thbs1P35441 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Thbs1P35441 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.18□□□□□ -0.3
Thbs1P35441 Gm15920-201ENSMUST00000118998 402 ntBASIC13.18□□□□□ -0.3
Thbs1P35441 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.18□□□□□ -0.3
Thbs1P35441 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.18□□□□□ -0.3
Thbs1P35441 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.18□□□□□ -0.3
Thbs1P35441 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.18□□□□□ -0.3
Thbs1P35441 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.18□□□□□ -0.3
Thbs1P35441 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.18□□□□□ -0.3
Thbs1P35441 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.18□□□□□ -0.3
Thbs1P35441 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.18□□□□□ -0.3
Thbs1P35441 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs1P35441 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thbs1P35441 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thbs1P35441 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Thbs1P35441 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Thbs1P35441 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Thbs1P35441 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.17□□□□□ -0.3
Thbs1P35441 Gm11745-201ENSMUST00000121669 448 ntBASIC13.17□□□□□ -0.3
Thbs1P35441 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.17□□□□□ -0.3
Thbs1P35441 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.17□□□□□ -0.3
Thbs1P35441 Gm27494-201ENSMUST00000184735 189 ntBASIC13.17□□□□□ -0.3
Thbs1P35441 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.17□□□□□ -0.3
Thbs1P35441 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Thbs1P35441 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.17□□□□□ -0.3
Thbs1P35441 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Thbs1P35441 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Thbs1P35441 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs1P35441 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Thbs1P35441 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thbs1P35441 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Thbs1P35441 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thbs1P35441 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.16□□□□□ -0.3
Thbs1P35441 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Thbs1P35441 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Thbs1P35441 Mir1895-201ENSMUST00000122615 79 ntBASIC13.16□□□□□ -0.3
Thbs1P35441 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.16□□□□□ -0.3
Thbs1P35441 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Auts2-212ENSMUST00000178555 309 ntBASIC13.16□□□□□ -0.3
Thbs1P35441 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.16□□□□□ -0.3
Thbs1P35441 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms