Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PdgfbP31240 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.17□□□□□ -0.14
PdgfbP31240 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.17□□□□□ -0.14
PdgfbP31240 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PdgfbP31240 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Gm22018-201ENSMUST00000104357 131 ntBASIC14.17□□□□□ -0.14
PdgfbP31240 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
PdgfbP31240 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.17□□□□□ -0.14
PdgfbP31240 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.17□□□□□ -0.14
PdgfbP31240 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.17□□□□□ -0.14
PdgfbP31240 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.17□□□□□ -0.14
PdgfbP31240 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.17□□□□□ -0.14
PdgfbP31240 Gm3961-201ENSMUST00000204425 994 ntBASIC14.17□□□□□ -0.14
PdgfbP31240 Gm7783-201ENSMUST00000204795 781 ntBASIC14.17□□□□□ -0.14
PdgfbP31240 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.17□□□□□ -0.14
PdgfbP31240 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.17□□□□□ -0.14
PdgfbP31240 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.17□□□□□ -0.14
PdgfbP31240 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.17□□□□□ -0.14
PdgfbP31240 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfbP31240 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.16□□□□□ -0.14
PdgfbP31240 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PdgfbP31240 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PdgfbP31240 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PdgfbP31240 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PdgfbP31240 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PdgfbP31240 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PdgfbP31240 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.16□□□□□ -0.14
PdgfbP31240 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.16□□□□□ -0.14
PdgfbP31240 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PdgfbP31240 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.16□□□□□ -0.14
PdgfbP31240 Gm27331-201ENSMUST00000183705 60 ntBASIC14.16□□□□□ -0.14
PdgfbP31240 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.16□□□□□ -0.14
PdgfbP31240 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.16□□□□□ -0.14
PdgfbP31240 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PdgfbP31240 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.16□□□□□ -0.14
PdgfbP31240 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PdgfbP31240 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfbP31240 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.15□□□□□ -0.14
PdgfbP31240 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Gm15371-201ENSMUST00000117057 784 ntBASIC14.15□□□□□ -0.14
PdgfbP31240 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.15□□□□□ -0.14
PdgfbP31240 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.15□□□□□ -0.14
PdgfbP31240 Gm26461-201ENSMUST00000175064 290 ntBASIC14.15□□□□□ -0.14
PdgfbP31240 Proscos-202ENSMUST00000178990 666 ntBASIC14.15□□□□□ -0.14
PdgfbP31240 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Gm38266-201ENSMUST00000194931 421 ntBASIC14.15□□□□□ -0.14
PdgfbP31240 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.15□□□□□ -0.14
PdgfbP31240 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.15□□□□□ -0.14
PdgfbP31240 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PdgfbP31240 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PdgfbP31240 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PdgfbP31240 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfbP31240 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms