Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.24■□□□□ 0.03
Aldh1a1P24549 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Gm29127-201ENSMUST00000188304 517 ntBASIC15.24■□□□□ 0.03
Aldh1a1P24549 Gm43179-201ENSMUST00000198797 275 ntBASIC15.24■□□□□ 0.03
Aldh1a1P24549 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.24■□□□□ 0.03
Aldh1a1P24549 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.24■□□□□ 0.03
Aldh1a1P24549 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Gm27772-201ENSMUST00000184900 187 ntBASIC15.23■□□□□ 0.03
Aldh1a1P24549 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.23■□□□□ 0.03
Aldh1a1P24549 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.23■□□□□ 0.03
Aldh1a1P24549 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.23■□□□□ 0.03
Aldh1a1P24549 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.22■□□□□ 0.03
Aldh1a1P24549 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Gm12384-201ENSMUST00000119228 919 ntBASIC15.22■□□□□ 0.03
Aldh1a1P24549 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.22■□□□□ 0.03
Aldh1a1P24549 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Gm18027-201ENSMUST00000218947 619 ntBASIC15.22■□□□□ 0.03
Aldh1a1P24549 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.22■□□□□ 0.03
Aldh1a1P24549 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.22■□□□□ 0.03
Aldh1a1P24549 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Aldh1a1P24549 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Aldh1a1P24549 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.21■□□□□ 0.03
Aldh1a1P24549 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms