Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.68□□□□□ -0.22
BdnfP21237 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BdnfP21237 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Gm16198-201ENSMUST00000118766 670 ntBASIC13.68□□□□□ -0.22
BdnfP21237 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BdnfP21237 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
BdnfP21237 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.68□□□□□ -0.22
BdnfP21237 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BdnfP21237 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
BdnfP21237 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
BdnfP21237 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
BdnfP21237 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.67□□□□□ -0.22
BdnfP21237 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
BdnfP21237 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Gm14042-201ENSMUST00000120139 833 ntBASIC13.67□□□□□ -0.22
BdnfP21237 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.67□□□□□ -0.22
BdnfP21237 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.67□□□□□ -0.22
BdnfP21237 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.67□□□□□ -0.22
BdnfP21237 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.67□□□□□ -0.22
BdnfP21237 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.67□□□□□ -0.22
BdnfP21237 Gm10154-201ENSMUST00000084445 354 ntBASIC13.67□□□□□ -0.22
BdnfP21237 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
BdnfP21237 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.67□□□□□ -0.22
BdnfP21237 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.67□□□□□ -0.22
BdnfP21237 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.67□□□□□ -0.22
BdnfP21237 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BdnfP21237 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.66□□□□□ -0.22
BdnfP21237 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.66□□□□□ -0.22
BdnfP21237 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.66□□□□□ -0.22
BdnfP21237 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.66□□□□□ -0.22
BdnfP21237 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.66□□□□□ -0.22
BdnfP21237 Gm2272-201ENSMUST00000194903 582 ntBASIC13.66□□□□□ -0.22
BdnfP21237 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.66□□□□□ -0.22
BdnfP21237 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BdnfP21237 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms