Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl3P10855 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccl3P10855 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccl3P10855 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.53□□□□□ -0.4
Ccl3P10855 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccl3P10855 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl3P10855 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.53□□□□□ -0.4
Ccl3P10855 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccl3P10855 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl3P10855 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccl3P10855 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ccl3P10855 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl3P10855 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl3P10855 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ccl3P10855 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl3P10855 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl3P10855 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl3P10855 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl3P10855 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl3P10855 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl3P10855 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl3P10855 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccl3P10855 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccl3P10855 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Gm13226-201ENSMUST00000117838 404 ntBASIC12.52□□□□□ -0.41
Ccl3P10855 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.52□□□□□ -0.41
Ccl3P10855 Gm13385-201ENSMUST00000121089 220 ntBASIC12.52□□□□□ -0.41
Ccl3P10855 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccl3P10855 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccl3P10855 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.52□□□□□ -0.41
Ccl3P10855 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccl3P10855 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccl3P10855 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Ccl3P10855 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccl3P10855 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl3P10855 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ccl3P10855 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccl3P10855 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.51□□□□□ -0.41
Ccl3P10855 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Gm12928-201ENSMUST00000117115 573 ntBASIC12.51□□□□□ -0.41
Ccl3P10855 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.51□□□□□ -0.41
Ccl3P10855 Gm15376-201ENSMUST00000122258 783 ntBASIC12.51□□□□□ -0.41
Ccl3P10855 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccl3P10855 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccl3P10855 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccl3P10855 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccl3P10855 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccl3P10855 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.51□□□□□ -0.41
Ccl3P10855 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms