Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp28P10078 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Zfp28P10078 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Zfp28P10078 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp28P10078 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp28P10078 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zfp28P10078 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.13□□□□□ -0.31
Zfp28P10078 Gm34391-201ENSMUST00000203706 907 ntBASIC13.13□□□□□ -0.31
Zfp28P10078 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp28P10078 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp28P10078 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.13□□□□□ -0.31
Zfp28P10078 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp28P10078 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.13□□□□□ -0.31
Zfp28P10078 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp28P10078 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp28P10078 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.12□□□□□ -0.31
Zfp28P10078 Gm8749-201ENSMUST00000117737 331 ntBASIC13.12□□□□□ -0.31
Zfp28P10078 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.12□□□□□ -0.31
Zfp28P10078 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp28P10078 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.12□□□□□ -0.31
Zfp28P10078 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Zfp28P10078 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Zfp28P10078 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Zfp28P10078 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Zfp28P10078 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp28P10078 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp28P10078 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Zfp28P10078 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.11□□□□□ -0.31
Zfp28P10078 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.11□□□□□ -0.31
Zfp28P10078 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Gm7230-201ENSMUST00000173026 815 ntBASIC13.11□□□□□ -0.31
Zfp28P10078 Gm27459-201ENSMUST00000184860 107 ntBASIC13.11□□□□□ -0.31
Zfp28P10078 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.11□□□□□ -0.31
Zfp28P10078 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp28P10078 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms