Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.46□□□□□ -0.25
Krt1P04104 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Krt1P04104 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.46□□□□□ -0.25
Krt1P04104 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Krt1P04104 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.46□□□□□ -0.25
Krt1P04104 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.46□□□□□ -0.25
Krt1P04104 Gm7506-201ENSMUST00000207758 815 ntBASIC13.46□□□□□ -0.25
Krt1P04104 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.46□□□□□ -0.25
Krt1P04104 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.46□□□□□ -0.25
Krt1P04104 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Krt1P04104 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt1P04104 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt1P04104 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt1P04104 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt1P04104 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Krt1P04104 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Krt1P04104 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Gm13836-201ENSMUST00000121159 501 ntBASIC13.45□□□□□ -0.26
Krt1P04104 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.45□□□□□ -0.26
Krt1P04104 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Krt1P04104 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Krt1P04104 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Krt1P04104 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt1P04104 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Krt1P04104 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.44□□□□□ -0.26
Krt1P04104 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.44□□□□□ -0.26
Krt1P04104 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Krt1P04104 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Gm13464-201ENSMUST00000119418 935 ntBASIC13.44□□□□□ -0.26
Krt1P04104 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.44□□□□□ -0.26
Krt1P04104 Gm6345-202ENSMUST00000180900 204 ntBASIC13.44□□□□□ -0.26
Krt1P04104 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Krt1P04104 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Krt1P04104 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.44□□□□□ -0.26
Krt1P04104 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Krt1P04104 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt1P04104 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt1P04104 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms