Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.2■□□□□ 0.34
Col4a1P02463 Gm5187-201ENSMUST00000117317 991 ntBASIC17.2■□□□□ 0.34
Col4a1P02463 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.2■□□□□ 0.34
Col4a1P02463 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.2■□□□□ 0.34
Col4a1P02463 Gm40466-201ENSMUST00000212174 422 ntBASIC17.2■□□□□ 0.34
Col4a1P02463 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.2■□□□□ 0.34
Col4a1P02463 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a1P02463 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.2■□□□□ 0.34
Col4a1P02463 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col4a1P02463 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col4a1P02463 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col4a1P02463 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col4a1P02463 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a1P02463 Gm10156-201ENSMUST00000122364 462 ntBASIC17.2■□□□□ 0.34
Col4a1P02463 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.2■□□□□ 0.34
Col4a1P02463 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.2■□□□□ 0.34
Col4a1P02463 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.2■□□□□ 0.34
Col4a1P02463 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a1P02463 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col4a1P02463 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.19■□□□□ 0.34
Col4a1P02463 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a1P02463 Gm7029-201ENSMUST00000173226 450 ntBASIC17.19■□□□□ 0.34
Col4a1P02463 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Gm5161-201ENSMUST00000075243 853 ntBASIC17.19■□□□□ 0.34
Col4a1P02463 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.19■□□□□ 0.34
Col4a1P02463 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.19■□□□□ 0.34
Col4a1P02463 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a1P02463 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a1P02463 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a1P02463 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Col4a1P02463 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a1P02463 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.18■□□□□ 0.34
Col4a1P02463 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a1P02463 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Gm27682-201ENSMUST00000183930 110 ntBASIC17.18■□□□□ 0.34
Col4a1P02463 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.18■□□□□ 0.34
Col4a1P02463 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col4a1P02463 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Col4a1P02463 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.18■□□□□ 0.34
Col4a1P02463 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a1P02463 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Col4a1P02463 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.17■□□□□ 0.34
Col4a1P02463 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.17■□□□□ 0.34
Col4a1P02463 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.17■□□□□ 0.34
Col4a1P02463 Gm29705-201ENSMUST00000212598 474 ntBASIC17.17■□□□□ 0.34
Col4a1P02463 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.17■□□□□ 0.34
Col4a1P02463 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.17■□□□□ 0.34
Col4a1P02463 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a1P02463 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.17■□□□□ 0.34
Col4a1P02463 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms