Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Syn1O88935 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Syn1O88935 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
Syn1O88935 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Syn1O88935 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.62□□□□□ -0.07
Syn1O88935 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Syn1O88935 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Gm27514-201ENSMUST00000183692 110 ntBASIC14.62□□□□□ -0.07
Syn1O88935 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Syn1O88935 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.62□□□□□ -0.07
Syn1O88935 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Syn1O88935 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Syn1O88935 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syn1O88935 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Syn1O88935 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.62□□□□□ -0.07
Syn1O88935 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Syn1O88935 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Syn1O88935 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Syn1O88935 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.61□□□□□ -0.07
Syn1O88935 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.61□□□□□ -0.07
Syn1O88935 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.61□□□□□ -0.07
Syn1O88935 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Gm37230-201ENSMUST00000194491 818 ntBASIC14.61□□□□□ -0.07
Syn1O88935 Gm43818-201ENSMUST00000200605 466 ntBASIC14.61□□□□□ -0.07
Syn1O88935 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Syn1O88935 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.61□□□□□ -0.07
Syn1O88935 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 BC037039-201ENSMUST00000192003 2205 ntBASIC14.61□□□□□ -0.07
Syn1O88935 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Syn1O88935 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syn1O88935 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Syn1O88935 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.6□□□□□ -0.07
Syn1O88935 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.6□□□□□ -0.07
Syn1O88935 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Gm7783-201ENSMUST00000204795 781 ntBASIC14.6□□□□□ -0.07
Syn1O88935 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Syn1O88935 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.6□□□□□ -0.07
Syn1O88935 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syn1O88935 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms