Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
ClppO88696 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ClppO88696 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ClppO88696 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ClppO88696 Gm13015-201ENSMUST00000118674 204 ntBASIC13.94□□□□□ -0.18
ClppO88696 Gm14767-201ENSMUST00000121559 586 ntBASIC13.94□□□□□ -0.18
ClppO88696 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Gm29541-201ENSMUST00000191351 678 ntBASIC13.94□□□□□ -0.18
ClppO88696 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.94□□□□□ -0.18
ClppO88696 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.94□□□□□ -0.18
ClppO88696 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ClppO88696 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.94□□□□□ -0.18
ClppO88696 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClppO88696 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ClppO88696 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ClppO88696 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ClppO88696 Gm13223-201ENSMUST00000118609 747 ntBASIC13.93□□□□□ -0.18
ClppO88696 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.93□□□□□ -0.18
ClppO88696 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.93□□□□□ -0.18
ClppO88696 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Gm28630-201ENSMUST00000187806 498 ntBASIC13.93□□□□□ -0.18
ClppO88696 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.93□□□□□ -0.18
ClppO88696 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.93□□□□□ -0.18
ClppO88696 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.93□□□□□ -0.18
ClppO88696 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ClppO88696 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ClppO88696 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ClppO88696 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.92□□□□□ -0.18
ClppO88696 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ClppO88696 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.92□□□□□ -0.18
ClppO88696 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
ClppO88696 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClppO88696 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms