Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ubr1O70481 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Ubr1O70481 Gm11661-201ENSMUST00000121761 1327 ntBASIC18.16■□□□□ 0.5
Ubr1O70481 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ubr1O70481 Gm42853-201ENSMUST00000201273 1387 ntBASIC18.16■□□□□ 0.5
Ubr1O70481 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubr1O70481 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ubr1O70481 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubr1O70481 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubr1O70481 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ubr1O70481 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ubr1O70481 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.15■□□□□ 0.5
Ubr1O70481 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ubr1O70481 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.15■□□□□ 0.5
Ubr1O70481 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.15■□□□□ 0.5
Ubr1O70481 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC18.15■□□□□ 0.5
Ubr1O70481 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.15■□□□□ 0.5
Ubr1O70481 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr1O70481 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ubr1O70481 Gm27572-201ENSMUST00000183702 255 ntBASIC18.14■□□□□ 0.5
Ubr1O70481 Gm27682-201ENSMUST00000183930 110 ntBASIC18.14■□□□□ 0.5
Ubr1O70481 Gm19184-201ENSMUST00000196798 928 ntBASIC18.14■□□□□ 0.5
Ubr1O70481 Gm17330-201ENSMUST00000221047 165 ntBASIC18.14■□□□□ 0.5
Ubr1O70481 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ubr1O70481 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ubr1O70481 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.14■□□□□ 0.5
Ubr1O70481 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Gm10339-203ENSMUST00000225409 1671 ntBASIC18.14■□□□□ 0.49
Ubr1O70481 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ubr1O70481 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Ubr1O70481 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC18.14■□□□□ 0.49
Ubr1O70481 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC18.14■□□□□ 0.49
Ubr1O70481 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ubr1O70481 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ubr1O70481 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr1O70481 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Ubr1O70481 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ubr1O70481 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Ubr1O70481 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ubr1O70481 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.13■□□□□ 0.49
Ubr1O70481 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.13■□□□□ 0.49
Ubr1O70481 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC18.13■□□□□ 0.49
Ubr1O70481 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Gm5370-201ENSMUST00000187187 574 ntBASIC18.13■□□□□ 0.49
Ubr1O70481 Gm43133-201ENSMUST00000197472 463 ntBASIC18.13■□□□□ 0.49
Ubr1O70481 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Ubr1O70481 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.13■□□□□ 0.49
Ubr1O70481 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.13■□□□□ 0.49
Ubr1O70481 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
Ubr1O70481 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr1O70481 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.12■□□□□ 0.49
Ubr1O70481 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Gm43179-201ENSMUST00000198797 275 ntBASIC18.12■□□□□ 0.49
Ubr1O70481 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC18.12■□□□□ 0.49
Ubr1O70481 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ubr1O70481 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Ubr1O70481 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 Mir686-201ENSMUST00000102174 109 ntBASIC18.12■□□□□ 0.49
Ubr1O70481 Gm13123-201ENSMUST00000122173 492 ntBASIC18.12■□□□□ 0.49
Ubr1O70481 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr1O70481 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms