Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.92□□□□□ -0.5
Gfi1bO70237 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Gfi1bO70237 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.92□□□□□ -0.5
Gfi1bO70237 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gfi1bO70237 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.92□□□□□ -0.5
Gfi1bO70237 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gfi1bO70237 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.91□□□□□ -0.5
Gfi1bO70237 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.91□□□□□ -0.5
Gfi1bO70237 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.91□□□□□ -0.5
Gfi1bO70237 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.91□□□□□ -0.5
Gfi1bO70237 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gfi1bO70237 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gfi1bO70237 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Gfi1bO70237 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Gfi1bO70237 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.9□□□□□ -0.5
Gfi1bO70237 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.9□□□□□ -0.5
Gfi1bO70237 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.9□□□□□ -0.5
Gfi1bO70237 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Gfi1bO70237 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gfi1bO70237 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Gfi1bO70237 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Gfi1bO70237 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Gfi1bO70237 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Gfi1bO70237 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gfi1bO70237 Gm7222-201ENSMUST00000117512 906 ntBASIC11.89□□□□□ -0.51
Gfi1bO70237 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Gfi1bO70237 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms