Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chrna4O70174 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chrna4O70174 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chrna4O70174 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Chrna4O70174 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chrna4O70174 Mir449b-201ENSMUST00000104833 80 ntBASIC14.39□□□□□ -0.11
Chrna4O70174 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.39□□□□□ -0.11
Chrna4O70174 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Chrna4O70174 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chrna4O70174 Gm10253-201ENSMUST00000194270 940 ntBASIC14.39□□□□□ -0.11
Chrna4O70174 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.39□□□□□ -0.11
Chrna4O70174 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chrna4O70174 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chrna4O70174 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chrna4O70174 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Chrna4O70174 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chrna4O70174 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.38□□□□□ -0.11
Chrna4O70174 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Chrna4O70174 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Gm14701-201ENSMUST00000117156 348 ntBASIC14.38□□□□□ -0.11
Chrna4O70174 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Gm27631-201ENSMUST00000184163 466 ntBASIC14.38□□□□□ -0.11
Chrna4O70174 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.38□□□□□ -0.11
Chrna4O70174 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.38□□□□□ -0.11
Chrna4O70174 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna4O70174 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Chrna4O70174 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chrna4O70174 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chrna4O70174 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.37□□□□□ -0.11
Chrna4O70174 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.37□□□□□ -0.11
Chrna4O70174 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chrna4O70174 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.37□□□□□ -0.11
Chrna4O70174 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms