Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cxcl13O55038 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.03□□□□□ -0.48
Cxcl13O55038 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Gm9794-201ENSMUST00000202370 423 ntBASIC12.03□□□□□ -0.48
Cxcl13O55038 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl13O55038 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl13O55038 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl13O55038 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl13O55038 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl13O55038 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.02□□□□□ -0.48
Cxcl13O55038 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cxcl13O55038 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl13O55038 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl13O55038 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl13O55038 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Gm37917-201ENSMUST00000194711 392 ntBASIC12.02□□□□□ -0.49
Cxcl13O55038 Gm37714-201ENSMUST00000194742 342 ntBASIC12.02□□□□□ -0.49
Cxcl13O55038 Gm8515-201ENSMUST00000194852 576 ntBASIC12.02□□□□□ -0.49
Cxcl13O55038 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Gm5425-201ENSMUST00000214125 459 ntBASIC12.02□□□□□ -0.49
Cxcl13O55038 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.02□□□□□ -0.49
Cxcl13O55038 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.02□□□□□ -0.49
Cxcl13O55038 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.02□□□□□ -0.49
Cxcl13O55038 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl13O55038 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl13O55038 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms