Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ChkaO54804 Mir8117-201ENSMUST00000184773 107 ntBASIC14.41□□□□□ -0.1
ChkaO54804 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.41□□□□□ -0.1
ChkaO54804 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.41□□□□□ -0.1
ChkaO54804 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ChkaO54804 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ChkaO54804 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ChkaO54804 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ChkaO54804 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ChkaO54804 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ChkaO54804 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ChkaO54804 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ChkaO54804 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ChkaO54804 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ChkaO54804 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.4□□□□□ -0.1
ChkaO54804 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.4□□□□□ -0.1
ChkaO54804 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.4□□□□□ -0.1
ChkaO54804 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Gm25911-201ENSMUST00000157621 56 ntBASIC14.4□□□□□ -0.1
ChkaO54804 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.4□□□□□ -0.1
ChkaO54804 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ChkaO54804 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ChkaO54804 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ChkaO54804 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
ChkaO54804 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.39□□□□□ -0.11
ChkaO54804 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ChkaO54804 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.39□□□□□ -0.11
ChkaO54804 Gm15467-201ENSMUST00000120582 445 ntBASIC14.39□□□□□ -0.11
ChkaO54804 Gm6443-201ENSMUST00000203599 874 ntBASIC14.39□□□□□ -0.11
ChkaO54804 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ChkaO54804 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ChkaO54804 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
ChkaO54804 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.39□□□□□ -0.11
ChkaO54804 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.39□□□□□ -0.11
ChkaO54804 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.39□□□□□ -0.11
ChkaO54804 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ChkaO54804 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.39□□□□□ -0.11
ChkaO54804 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ChkaO54804 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
ChkaO54804 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.38□□□□□ -0.11
ChkaO54804 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.38□□□□□ -0.11
ChkaO54804 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.38□□□□□ -0.11
ChkaO54804 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ChkaO54804 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.38□□□□□ -0.11
ChkaO54804 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.38□□□□□ -0.11
ChkaO54804 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.38□□□□□ -0.11
ChkaO54804 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.38□□□□□ -0.11
ChkaO54804 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ChkaO54804 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ChkaO54804 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms