Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nr1i3O35627 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Nr1i3O35627 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Nr1i3O35627 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.3■□□□□ 0.04
Nr1i3O35627 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nr1i3O35627 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm29310-201ENSMUST00000185468 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21825-201ENSMUST00000185728 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm29109-201ENSMUST00000185895 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21896-201ENSMUST00000186520 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21873-201ENSMUST00000186728 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21794-201ENSMUST00000187056 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21880-201ENSMUST00000187275 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21826-201ENSMUST00000187451 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21198-201ENSMUST00000188393 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21749-201ENSMUST00000189343 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21901-201ENSMUST00000189568 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm29424-201ENSMUST00000189716 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm28599-201ENSMUST00000189838 694 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21867-201ENSMUST00000189917 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm29269-201ENSMUST00000190087 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21722-201ENSMUST00000190153 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm28423-201ENSMUST00000190701 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21899-201ENSMUST00000190745 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21910-201ENSMUST00000191163 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21849-201ENSMUST00000191571 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm28678-201ENSMUST00000191593 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm20910-201ENSMUST00000193268 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Gm21871-201ENSMUST00000194621 696 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.3■□□□□ 0.04
Nr1i3O35627 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nr1i3O35627 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1i3O35627 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.29■□□□□ 0.04
Nr1i3O35627 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.29■□□□□ 0.04
Nr1i3O35627 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.29■□□□□ 0.04
Nr1i3O35627 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.29■□□□□ 0.04
Nr1i3O35627 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.29■□□□□ 0.04
Nr1i3O35627 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Gm38225-201ENSMUST00000194001 393 ntBASIC15.29■□□□□ 0.04
Nr1i3O35627 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.29■□□□□ 0.04
Nr1i3O35627 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.29■□□□□ 0.04
Nr1i3O35627 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr1i3O35627 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nr1i3O35627 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.28■□□□□ 0.04
Nr1i3O35627 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.28■□□□□ 0.04
Nr1i3O35627 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nr1i3O35627 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms