Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.07■□□□□ 0.48
Col15a1O35206 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC18.07■□□□□ 0.48
Col15a1O35206 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Gm22331-201ENSMUST00000158066 136 ntBASIC18.07■□□□□ 0.48
Col15a1O35206 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Gm18054-201ENSMUST00000207539 555 ntBASIC18.07■□□□□ 0.48
Col15a1O35206 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.07■□□□□ 0.48
Col15a1O35206 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.07■□□□□ 0.48
Col15a1O35206 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.07■□□□□ 0.48
Col15a1O35206 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Col15a1O35206 Gm24447-201ENSMUST00000083977 338 ntBASIC18.07■□□□□ 0.48
Col15a1O35206 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col15a1O35206 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col15a1O35206 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.07■□□□□ 0.48
Col15a1O35206 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col15a1O35206 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18.07■□□□□ 0.48
Col15a1O35206 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.07■□□□□ 0.48
Col15a1O35206 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col15a1O35206 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col15a1O35206 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Gm12384-201ENSMUST00000119228 919 ntBASIC18.06■□□□□ 0.48
Col15a1O35206 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Col15a1O35206 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.06■□□□□ 0.48
Col15a1O35206 Gm8810-201ENSMUST00000172895 754 ntBASIC18.06■□□□□ 0.48
Col15a1O35206 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col15a1O35206 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.06■□□□□ 0.48
Col15a1O35206 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col15a1O35206 Gm5161-201ENSMUST00000075243 853 ntBASIC18.06■□□□□ 0.48
Col15a1O35206 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.06■□□□□ 0.48
Col15a1O35206 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col15a1O35206 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col15a1O35206 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col15a1O35206 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.06■□□□□ 0.48
Col15a1O35206 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col15a1O35206 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.05■□□□□ 0.48
Col15a1O35206 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Gm27572-201ENSMUST00000183702 255 ntBASIC18.05■□□□□ 0.48
Col15a1O35206 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.05■□□□□ 0.48
Col15a1O35206 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.05■□□□□ 0.48
Col15a1O35206 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col15a1O35206 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col15a1O35206 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.05■□□□□ 0.48
Col15a1O35206 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.05■□□□□ 0.48
Col15a1O35206 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col15a1O35206 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
Col15a1O35206 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col15a1O35206 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col15a1O35206 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Gm29741-201ENSMUST00000192667 421 ntBASIC18.04■□□□□ 0.48
Col15a1O35206 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.04■□□□□ 0.48
Col15a1O35206 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col15a1O35206 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms