Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Gm10766-202ENSMUST00000194123 606 ntBASIC14□□□□□ -0.17
Bhlhe40O35185 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14□□□□□ -0.17
Bhlhe40O35185 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14□□□□□ -0.17
Bhlhe40O35185 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14□□□□□ -0.17
Bhlhe40O35185 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Bhlhe40O35185 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Gm15393-201ENSMUST00000120499 219 ntBASIC13.99□□□□□ -0.17
Bhlhe40O35185 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Gm9797-201ENSMUST00000052902 613 ntBASIC13.99□□□□□ -0.17
Bhlhe40O35185 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Bhlhe40O35185 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.98□□□□□ -0.17
Bhlhe40O35185 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Gm12585-201ENSMUST00000117307 290 ntBASIC13.98□□□□□ -0.17
Bhlhe40O35185 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bhlhe40O35185 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bhlhe40O35185 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Bhlhe40O35185 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.97□□□□□ -0.17
Bhlhe40O35185 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Bhlhe40O35185 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bhlhe40O35185 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bhlhe40O35185 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bhlhe40O35185 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.97□□□□□ -0.17
Bhlhe40O35185 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bhlhe40O35185 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms