Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC21.52■■□□□ 1.04
Polr1aO35134 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Polr1aO35134 Rn7sk-201ENSMUST00000083103 331 ntBASIC21.52■■□□□ 1.04
Polr1aO35134 Gm26315-201ENSMUST00000083890 321 ntBASIC21.52■■□□□ 1.04
Polr1aO35134 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Polr1aO35134 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Polr1aO35134 Gm12846-201ENSMUST00000120431 1373 ntBASIC21.52■■□□□ 1.04
Polr1aO35134 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Polr1aO35134 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Polr1aO35134 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Polr1aO35134 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Polr1aO35134 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Polr1aO35134 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Polr1aO35134 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Polr1aO35134 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Polr1aO35134 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Polr1aO35134 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC21.52■■□□□ 1.03
Polr1aO35134 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Polr1aO35134 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
Polr1aO35134 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC21.51■■□□□ 1.03
Polr1aO35134 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC21.51■■□□□ 1.03
Polr1aO35134 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC21.51■■□□□ 1.03
Polr1aO35134 Gm19309-201ENSMUST00000218295 205 ntBASIC21.51■■□□□ 1.03
Polr1aO35134 AC154276.1-201ENSMUST00000228874 1299 ntBASIC21.51■■□□□ 1.03
Polr1aO35134 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Polr1aO35134 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Polr1aO35134 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Polr1aO35134 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Polr1aO35134 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC21.5■■□□□ 1.03
Polr1aO35134 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC21.5■■□□□ 1.03
Polr1aO35134 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr1aO35134 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Polr1aO35134 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC21.49■■□□□ 1.03
Polr1aO35134 Gm37497-201ENSMUST00000195830 798 ntBASIC21.49■■□□□ 1.03
Polr1aO35134 Gm3961-201ENSMUST00000204425 994 ntBASIC21.49■■□□□ 1.03
Polr1aO35134 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC21.49■■□□□ 1.03
Polr1aO35134 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Polr1aO35134 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Polr1aO35134 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Polr1aO35134 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC21.49■■□□□ 1.03
Polr1aO35134 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC21.49■■□□□ 1.03
Polr1aO35134 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC21.49■■□□□ 1.03
Polr1aO35134 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC21.49■■□□□ 1.03
Polr1aO35134 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC21.49■■□□□ 1.03
Polr1aO35134 Gm17823-201ENSMUST00000217830 1006 ntBASIC21.49■■□□□ 1.03
Polr1aO35134 CT009713.10-202ENSMUST00000225734 696 ntBASIC21.49■■□□□ 1.03
Polr1aO35134 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr1aO35134 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC21.48■■□□□ 1.03
Polr1aO35134 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Polr1aO35134 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC21.48■■□□□ 1.03
Polr1aO35134 Gm13123-201ENSMUST00000122173 492 ntBASIC21.48■■□□□ 1.03
Polr1aO35134 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 Gm17383-201ENSMUST00000078739 1041 ntBASIC21.48■■□□□ 1.03
Polr1aO35134 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr1aO35134 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Polr1aO35134 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Polr1aO35134 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr1aO35134 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Polr1aO35134 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms