Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.67■□□□□ 0.26
Tcof1O08784 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.67■□□□□ 0.26
Tcof1O08784 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.67■□□□□ 0.26
Tcof1O08784 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tcof1O08784 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tcof1O08784 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tcof1O08784 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tcof1O08784 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tcof1O08784 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.66■□□□□ 0.26
Tcof1O08784 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tcof1O08784 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.66■□□□□ 0.26
Tcof1O08784 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.66■□□□□ 0.26
Tcof1O08784 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Gm9229-201ENSMUST00000222777 126 ntBASIC16.66■□□□□ 0.26
Tcof1O08784 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Tcof1O08784 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcof1O08784 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.65■□□□□ 0.26
Tcof1O08784 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.65■□□□□ 0.26
Tcof1O08784 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.65■□□□□ 0.26
Tcof1O08784 Gm15957-201ENSMUST00000118893 974 ntBASIC16.65■□□□□ 0.26
Tcof1O08784 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.65■□□□□ 0.26
Tcof1O08784 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.65■□□□□ 0.26
Tcof1O08784 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.65■□□□□ 0.26
Tcof1O08784 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Tcof1O08784 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Tcof1O08784 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.65■□□□□ 0.26
Tcof1O08784 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tcof1O08784 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Tcof1O08784 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
Tcof1O08784 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Tcof1O08784 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Tcof1O08784 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tcof1O08784 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tcof1O08784 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.64■□□□□ 0.25
Tcof1O08784 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Gm3436-201ENSMUST00000179930 840 ntBASIC16.64■□□□□ 0.25
Tcof1O08784 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tcof1O08784 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Tcof1O08784 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tcof1O08784 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcof1O08784 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tcof1O08784 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms