Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Gm5687-201ENSMUST00000118252 640 ntBASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc180J3QNE4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Zscan30-202ENSMUST00000224144 1458 ntBASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Gm22331-201ENSMUST00000158066 136 ntBASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Rassf8-202ENSMUST00000058538 1131 ntBASIC25.55■■□□□ 1.68
Ccdc180J3QNE4 Gm42853-201ENSMUST00000201273 1387 ntBASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Gm27847-201ENSMUST00000183711 107 ntBASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Gm27375-201ENSMUST00000183799 107 ntBASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Gm9299-201ENSMUST00000206392 1140 ntBASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Gm45841-201ENSMUST00000207700 164 ntBASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 AC140451.2-201ENSMUST00000228030 664 ntBASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Gm9856-201ENSMUST00000217077 2578 ntBASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc180J3QNE4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Gm45760-201ENSMUST00000212190 1782 ntBASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc180J3QNE4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Gm42929-201ENSMUST00000198374 1286 ntBASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Gm17870-201ENSMUST00000219489 1174 ntBASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Gm5370-201ENSMUST00000187187 574 ntBASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC25.52■■□□□ 1.68
Ccdc180J3QNE4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.68
Ccdc180J3QNE4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc180J3QNE4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc180J3QNE4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc180J3QNE4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc180J3QNE4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms