Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Gm45212-201ENSMUST00000205831 3403 ntBASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Gm20632-201ENSMUST00000176760 2427 ntBASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Gm13886-201ENSMUST00000117876 1183 ntBASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Gm27514-201ENSMUST00000183692 110 ntBASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 AC140451.2-201ENSMUST00000228030 664 ntBASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC21.23■□□□□ 0.99
Pcf11G3X9Z4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Gm10040-201ENSMUST00000080726 1662 ntBASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Zscan30-202ENSMUST00000224144 1458 ntBASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcf11G3X9Z4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Gm45504-201ENSMUST00000211407 2107 ntBASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Gm17420-201ENSMUST00000164753 153 ntBASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Gm38671-201ENSMUST00000200573 130 ntBASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcf11G3X9Z4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Pcf11G3X9Z4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Pcf11G3X9Z4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Gm5687-201ENSMUST00000118252 640 ntBASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Gm27331-201ENSMUST00000183705 60 ntBASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Gm27731-201ENSMUST00000185192 107 ntBASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Gm9299-201ENSMUST00000206392 1140 ntBASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Gm24447-201ENSMUST00000083977 338 ntBASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcf11G3X9Z4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gm12742-201ENSMUST00000117326 410 ntBASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gm10156-201ENSMUST00000122364 462 ntBASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms