Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Gm17271-201ENSMUST00000165535 355 ntBASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh9F8VPK8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh9F8VPK8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Gm11543-201ENSMUST00000120758 370 ntBASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Gm10175-201ENSMUST00000086013 645 ntBASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh9F8VPK8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.58□□□□□ -0.07
Pcdh9F8VPK8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Pcdh9F8VPK8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh9F8VPK8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh9F8VPK8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh9F8VPK8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh9F8VPK8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.58□□□□□ -0.07
Pcdh9F8VPK8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms