Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
R3hdm1E9Q9Q2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
R3hdm1E9Q9Q2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Mir1982-201ENSMUST00000157368 74 ntBASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Gm45841-201ENSMUST00000207700 164 ntBASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm1E9Q9Q2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm1E9Q9Q2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Gm12957-201ENSMUST00000117835 377 ntBASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Gm9229-201ENSMUST00000222777 126 ntBASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm1E9Q9Q2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.69■□□□□ 0.1
R3hdm1E9Q9Q2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms