Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.38□□□□□ -0.11
Col4a6B1AVK5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Gm37497-201ENSMUST00000195830 798 ntBASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Gm43822-201ENSMUST00000200285 476 ntBASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Gm7783-201ENSMUST00000204795 781 ntBASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Gm17330-201ENSMUST00000221047 165 ntBASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a6B1AVK5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Gm24526-201ENSMUST00000082921 158 ntBASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.37□□□□□ -0.11
Col4a6B1AVK5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gm14350-201ENSMUST00000116642 640 ntBASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gm8584-201ENSMUST00000171982 758 ntBASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Olfr284-202ENSMUST00000206647 966 ntBASIC14.36□□□□□ -0.11
Col4a6B1AVK5 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gm38341-201ENSMUST00000195357 515 ntBASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a6B1AVK5 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms