Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Ubr4A2AN08 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Ubr4A2AN08 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm10076-201ENSMUST00000073238 384 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 AC167669.2-201ENSMUST00000224417 1620 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm12485-201ENSMUST00000119641 291 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm8492-201ENSMUST00000182375 987 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm28693-202ENSMUST00000190758 331 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm44262-201ENSMUST00000204969 372 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm9555-201ENSMUST00000200908 583 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm23062-201ENSMUST00000102349 110 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Gm6170-201ENSMUST00000187672 1388 ntBASIC7.33□□□□□ -1.24
Ubr4A2AN08 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ubr4A2AN08 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ubr4A2AN08 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Gm24749-201ENSMUST00000157838 343 ntBASIC7.32□□□□□ -1.24
Ubr4A2AN08 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Gm24420-201ENSMUST00000176676 59 ntBASIC7.32□□□□□ -1.24
Ubr4A2AN08 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 AC123645.1-201ENSMUST00000228469 605 ntBASIC7.32□□□□□ -1.24
Ubr4A2AN08 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Gm37666-201ENSMUST00000194110 866 ntBASIC7.32□□□□□ -1.24
Ubr4A2AN08 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Gm42918-201ENSMUST00000199249 1580 ntBASIC7.32□□□□□ -1.24
Ubr4A2AN08 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ubr4A2AN08 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms