Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Gm6218-201ENSMUST00000219812 628 ntBASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap99A0A140LIX9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Gm14928-201ENSMUST00000120198 477 ntBASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Gm29667-201ENSMUST00000190817 490 ntBASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Gm18187-201ENSMUST00000196476 984 ntBASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.02■□□□□ 0.32
Cfap99A0A140LIX9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cfap99A0A140LIX9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cfap99A0A140LIX9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.02■□□□□ 0.31
Cfap99A0A140LIX9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cfap99A0A140LIX9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cfap99A0A140LIX9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Gm15653-201ENSMUST00000119247 907 ntBASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Mir1897-201ENSMUST00000122581 272 ntBASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfap99A0A140LIX9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cfap99A0A140LIX9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cfap99A0A140LIX9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms