Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clca3a1Q9QX15 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Clca3a1Q9QX15 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.61■□□□□ 0.89
Clca3a1Q9QX15 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3a1Q9QX15 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.59■□□□□ 0.89
Clca3a1Q9QX15 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Clca3a1Q9QX15 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.59■□□□□ 0.89
Clca3a1Q9QX15 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3a1Q9QX15 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3a1Q9QX15 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.59■□□□□ 0.89
Clca3a1Q9QX15 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.58■□□□□ 0.89
Clca3a1Q9QX15 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clca3a1Q9QX15 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Clca3a1Q9QX15 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clca3a1Q9QX15 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clca3a1Q9QX15 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clca3a1Q9QX15 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.57■□□□□ 0.88
Clca3a1Q9QX15 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Gm9806-201ENSMUST00000051080 552 ntBASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clca3a1Q9QX15 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca3a1Q9QX15 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.54■□□□□ 0.88
Clca3a1Q9QX15 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.54■□□□□ 0.88
Clca3a1Q9QX15 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clca3a1Q9QX15 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.54■□□□□ 0.88
Clca3a1Q9QX15 Scarna2-201ENSMUST00000157560 414 ntBASIC20.54■□□□□ 0.88
Clca3a1Q9QX15 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clca3a1Q9QX15 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca3a1Q9QX15 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca3a1Q9QX15 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Clca3a1Q9QX15 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca3a1Q9QX15 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca3a1Q9QX15 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Clca3a1Q9QX15 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Clca3a1Q9QX15 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Clca3a1Q9QX15 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clca3a1Q9QX15 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clca3a1Q9QX15 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clca3a1Q9QX15 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clca3a1Q9QX15 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.51■□□□□ 0.87
Clca3a1Q9QX15 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clca3a1Q9QX15 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca3a1Q9QX15 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca3a1Q9QX15 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca3a1Q9QX15 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clca3a1Q9QX15 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca3a1Q9QX15 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clca3a1Q9QX15 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.5■□□□□ 0.87
Clca3a1Q9QX15 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clca3a1Q9QX15 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clca3a1Q9QX15 Gm11687-201ENSMUST00000118911 886 ntBASIC20.49■□□□□ 0.87
Clca3a1Q9QX15 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Clca3a1Q9QX15 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clca3a1Q9QX15 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clca3a1Q9QX15 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clca3a1Q9QX15 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Gm44428-201ENSMUST00000204474 874 ntBASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Gm16437-201ENSMUST00000025669 507 ntBASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca3a1Q9QX15 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca3a1Q9QX15 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca3a1Q9QX15 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms