Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Sec61a2Q9JLR1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Sec61a2Q9JLR1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sec61a2Q9JLR1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.58■□□□□ 0.73
Sec61a2Q9JLR1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sec61a2Q9JLR1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sec61a2Q9JLR1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sec61a2Q9JLR1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sec61a2Q9JLR1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Sec61a2Q9JLR1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sec61a2Q9JLR1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sec61a2Q9JLR1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Sec61a2Q9JLR1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Sec61a2Q9JLR1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sec61a2Q9JLR1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.57■□□□□ 0.72
Sec61a2Q9JLR1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sec61a2Q9JLR1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sec61a2Q9JLR1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.57■□□□□ 0.72
Sec61a2Q9JLR1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sec61a2Q9JLR1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sec61a2Q9JLR1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a2Q9JLR1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a2Q9JLR1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a2Q9JLR1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sec61a2Q9JLR1 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.53■□□□□ 0.72
Sec61a2Q9JLR1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sec61a2Q9JLR1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.53■□□□□ 0.72
Sec61a2Q9JLR1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sec61a2Q9JLR1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.53■□□□□ 0.72
Sec61a2Q9JLR1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sec61a2Q9JLR1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.52■□□□□ 0.72
Sec61a2Q9JLR1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sec61a2Q9JLR1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sec61a2Q9JLR1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sec61a2Q9JLR1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Sec61a2Q9JLR1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sec61a2Q9JLR1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.51■□□□□ 0.71
Sec61a2Q9JLR1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a2Q9JLR1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a2Q9JLR1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a2Q9JLR1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a2Q9JLR1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a2Q9JLR1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a2Q9JLR1 Cap2-205ENSMUST00000225824 1634 ntBASIC19.51■□□□□ 0.71
Sec61a2Q9JLR1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sec61a2Q9JLR1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.5■□□□□ 0.71
Sec61a2Q9JLR1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sec61a2Q9JLR1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.5■□□□□ 0.71
Sec61a2Q9JLR1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sec61a2Q9JLR1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sec61a2Q9JLR1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sec61a2Q9JLR1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sec61a2Q9JLR1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sec61a2Q9JLR1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sec61a2Q9JLR1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec61a2Q9JLR1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec61a2Q9JLR1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec61a2Q9JLR1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec61a2Q9JLR1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec61a2Q9JLR1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms