Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clca3a2Q9EQR4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clca3a2Q9EQR4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.99■□□□□ 0.95
Clca3a2Q9EQR4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Clca3a2Q9EQR4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Clca3a2Q9EQR4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Gm12366-201ENSMUST00000121722 873 ntBASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Gm5786-201ENSMUST00000085368 882 ntBASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.98■□□□□ 0.95
Clca3a2Q9EQR4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a2Q9EQR4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a2Q9EQR4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.97■□□□□ 0.95
Clca3a2Q9EQR4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a2Q9EQR4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a2Q9EQR4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.97■□□□□ 0.95
Clca3a2Q9EQR4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a2Q9EQR4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clca3a2Q9EQR4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Clca3a2Q9EQR4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clca3a2Q9EQR4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clca3a2Q9EQR4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Clca3a2Q9EQR4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clca3a2Q9EQR4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clca3a2Q9EQR4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.96■□□□□ 0.95
Clca3a2Q9EQR4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.96■□□□□ 0.95
Clca3a2Q9EQR4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clca3a2Q9EQR4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca3a2Q9EQR4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca3a2Q9EQR4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clca3a2Q9EQR4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca3a2Q9EQR4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clca3a2Q9EQR4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clca3a2Q9EQR4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clca3a2Q9EQR4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clca3a2Q9EQR4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Clca3a2Q9EQR4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clca3a2Q9EQR4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Clca3a2Q9EQR4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clca3a2Q9EQR4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clca3a2Q9EQR4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clca3a2Q9EQR4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.9■□□□□ 0.94
Clca3a2Q9EQR4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clca3a2Q9EQR4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clca3a2Q9EQR4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Clca3a2Q9EQR4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Clca3a2Q9EQR4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Clca3a2Q9EQR4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clca3a2Q9EQR4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.89■□□□□ 0.93
Clca3a2Q9EQR4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clca3a2Q9EQR4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clca3a2Q9EQR4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clca3a2Q9EQR4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clca3a2Q9EQR4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clca3a2Q9EQR4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clca3a2Q9EQR4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clca3a2Q9EQR4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.88■□□□□ 0.93
Clca3a2Q9EQR4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clca3a2Q9EQR4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clca3a2Q9EQR4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clca3a2Q9EQR4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clca3a2Q9EQR4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clca3a2Q9EQR4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clca3a2Q9EQR4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Clca3a2Q9EQR4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clca3a2Q9EQR4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clca3a2Q9EQR4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clca3a2Q9EQR4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clca3a2Q9EQR4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clca3a2Q9EQR4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clca3a2Q9EQR4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clca3a2Q9EQR4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.84■□□□□ 0.93
Clca3a2Q9EQR4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clca3a2Q9EQR4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms