Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rtl8cQ9D6I0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rtl8cQ9D6I0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.57■□□□□ 0.72
Rtl8cQ9D6I0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl8cQ9D6I0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl8cQ9D6I0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl8cQ9D6I0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl8cQ9D6I0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rtl8cQ9D6I0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl8cQ9D6I0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl8cQ9D6I0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl8cQ9D6I0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl8cQ9D6I0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl8cQ9D6I0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl8cQ9D6I0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.54■□□□□ 0.72
Rtl8cQ9D6I0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Rtl8cQ9D6I0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.54■□□□□ 0.72
Rtl8cQ9D6I0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl8cQ9D6I0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rtl8cQ9D6I0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rtl8cQ9D6I0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtl8cQ9D6I0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rtl8cQ9D6I0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rtl8cQ9D6I0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl8cQ9D6I0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl8cQ9D6I0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl8cQ9D6I0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl8cQ9D6I0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Rtl8cQ9D6I0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl8cQ9D6I0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.51■□□□□ 0.71
Rtl8cQ9D6I0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rtl8cQ9D6I0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl8cQ9D6I0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rtl8cQ9D6I0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl8cQ9D6I0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl8cQ9D6I0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl8cQ9D6I0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl8cQ9D6I0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl8cQ9D6I0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl8cQ9D6I0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl8cQ9D6I0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl8cQ9D6I0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl8cQ9D6I0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl8cQ9D6I0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl8cQ9D6I0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl8cQ9D6I0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl8cQ9D6I0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl8cQ9D6I0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.48■□□□□ 0.71
Rtl8cQ9D6I0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl8cQ9D6I0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl8cQ9D6I0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl8cQ9D6I0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl8cQ9D6I0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl8cQ9D6I0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtl8cQ9D6I0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl8cQ9D6I0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl8cQ9D6I0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl8cQ9D6I0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.45■□□□□ 0.7
Rtl8cQ9D6I0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl8cQ9D6I0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl8cQ9D6I0 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.45■□□□□ 0.7
Rtl8cQ9D6I0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rtl8cQ9D6I0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl8cQ9D6I0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rtl8cQ9D6I0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl8cQ9D6I0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl8cQ9D6I0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl8cQ9D6I0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl8cQ9D6I0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl8cQ9D6I0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl8cQ9D6I0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Rtl8cQ9D6I0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms