Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim13Q9CYB0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim13Q9CYB0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim13Q9CYB0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim13Q9CYB0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim13Q9CYB0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim13Q9CYB0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim13Q9CYB0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim13Q9CYB0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim13Q9CYB0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim13Q9CYB0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.14■□□□□ 0.81
Trim13Q9CYB0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim13Q9CYB0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim13Q9CYB0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim13Q9CYB0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim13Q9CYB0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim13Q9CYB0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim13Q9CYB0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.13■□□□□ 0.81
Trim13Q9CYB0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim13Q9CYB0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trim13Q9CYB0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim13Q9CYB0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim13Q9CYB0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim13Q9CYB0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim13Q9CYB0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim13Q9CYB0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim13Q9CYB0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim13Q9CYB0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim13Q9CYB0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim13Q9CYB0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim13Q9CYB0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim13Q9CYB0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim13Q9CYB0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim13Q9CYB0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.1■□□□□ 0.81
Trim13Q9CYB0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim13Q9CYB0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim13Q9CYB0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim13Q9CYB0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim13Q9CYB0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim13Q9CYB0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim13Q9CYB0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim13Q9CYB0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim13Q9CYB0 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.08■□□□□ 0.8
Trim13Q9CYB0 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.07■□□□□ 0.8
Trim13Q9CYB0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim13Q9CYB0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim13Q9CYB0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim13Q9CYB0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim13Q9CYB0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim13Q9CYB0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim13Q9CYB0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Trim13Q9CYB0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim13Q9CYB0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim13Q9CYB0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim13Q9CYB0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim13Q9CYB0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim13Q9CYB0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim13Q9CYB0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim13Q9CYB0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim13Q9CYB0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim13Q9CYB0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim13Q9CYB0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim13Q9CYB0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim13Q9CYB0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim13Q9CYB0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim13Q9CYB0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim13Q9CYB0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trim13Q9CYB0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim13Q9CYB0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim13Q9CYB0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim13Q9CYB0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim13Q9CYB0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim13Q9CYB0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim13Q9CYB0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.01■□□□□ 0.79
Trim13Q9CYB0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim13Q9CYB0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim13Q9CYB0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim13Q9CYB0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 229.3 ms