Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Vta1Q9CR26 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.17■■□□□ 1.62
Vta1Q9CR26 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Vta1Q9CR26 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Vta1Q9CR26 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vta1Q9CR26 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vta1Q9CR26 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.16■■□□□ 1.62
Vta1Q9CR26 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.16■■□□□ 1.62
Vta1Q9CR26 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Vta1Q9CR26 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vta1Q9CR26 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Vta1Q9CR26 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Vta1Q9CR26 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Vta1Q9CR26 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Vta1Q9CR26 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.14■■□□□ 1.62
Vta1Q9CR26 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Vta1Q9CR26 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vta1Q9CR26 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vta1Q9CR26 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vta1Q9CR26 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.13■■□□□ 1.61
Vta1Q9CR26 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Vta1Q9CR26 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.12■■□□□ 1.61
Vta1Q9CR26 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Vta1Q9CR26 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.12■■□□□ 1.61
Vta1Q9CR26 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
Vta1Q9CR26 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vta1Q9CR26 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.12■■□□□ 1.61
Vta1Q9CR26 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.12■■□□□ 1.61
Vta1Q9CR26 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vta1Q9CR26 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.12■■□□□ 1.61
Vta1Q9CR26 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Vta1Q9CR26 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Vta1Q9CR26 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vta1Q9CR26 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.11■■□□□ 1.61
Vta1Q9CR26 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vta1Q9CR26 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vta1Q9CR26 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC25.11■■□□□ 1.61
Vta1Q9CR26 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.11■■□□□ 1.61
Vta1Q9CR26 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vta1Q9CR26 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
Vta1Q9CR26 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vta1Q9CR26 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.09■■□□□ 1.61
Vta1Q9CR26 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Vta1Q9CR26 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
Vta1Q9CR26 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Vta1Q9CR26 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Vta1Q9CR26 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.09■■□□□ 1.61
Vta1Q9CR26 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Vta1Q9CR26 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Vta1Q9CR26 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.08■■□□□ 1.61
Vta1Q9CR26 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.08■■□□□ 1.61
Vta1Q9CR26 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vta1Q9CR26 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vta1Q9CR26 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vta1Q9CR26 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.07■■□□□ 1.6
Vta1Q9CR26 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vta1Q9CR26 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.07■■□□□ 1.6
Vta1Q9CR26 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Vta1Q9CR26 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Vta1Q9CR26 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Vta1Q9CR26 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.06■■□□□ 1.6
Vta1Q9CR26 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Vta1Q9CR26 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Vta1Q9CR26 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
Vta1Q9CR26 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.05■■□□□ 1.6
Vta1Q9CR26 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.05■■□□□ 1.6
Vta1Q9CR26 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Vta1Q9CR26 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Vta1Q9CR26 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Vta1Q9CR26 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Vta1Q9CR26 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.04■■□□□ 1.6
Vta1Q9CR26 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Vta1Q9CR26 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vta1Q9CR26 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Vta1Q9CR26 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.02■■□□□ 1.6
Vta1Q9CR26 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vta1Q9CR26 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Vta1Q9CR26 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
Vta1Q9CR26 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.02■■□□□ 1.6
Vta1Q9CR26 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vta1Q9CR26 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vta1Q9CR26 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vta1Q9CR26 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vta1Q9CR26 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Vta1Q9CR26 Gm7417-201ENSMUST00000192950 473 ntBASIC25.01■■□□□ 1.59
Vta1Q9CR26 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.01■■□□□ 1.59
Vta1Q9CR26 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vta1Q9CR26 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25■■□□□ 1.59
Vta1Q9CR26 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Vta1Q9CR26 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25■■□□□ 1.59
Vta1Q9CR26 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25■■□□□ 1.59
Vta1Q9CR26 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25■■□□□ 1.59
Vta1Q9CR26 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Vta1Q9CR26 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.99■■□□□ 1.59
Vta1Q9CR26 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.99■■□□□ 1.59
Vta1Q9CR26 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.99■■□□□ 1.59
Vta1Q9CR26 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Vta1Q9CR26 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Vta1Q9CR26 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Vta1Q9CR26 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms