Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Krt88Q9CPR6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Krt88Q9CPR6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt88Q9CPR6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.73■□□□□ 0.75
Krt88Q9CPR6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Krt88Q9CPR6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt88Q9CPR6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt88Q9CPR6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt88Q9CPR6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt88Q9CPR6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt88Q9CPR6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Krt88Q9CPR6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt88Q9CPR6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Krt88Q9CPR6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt88Q9CPR6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.71■□□□□ 0.75
Krt88Q9CPR6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.71■□□□□ 0.75
Krt88Q9CPR6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt88Q9CPR6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt88Q9CPR6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Krt88Q9CPR6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt88Q9CPR6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Krt88Q9CPR6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt88Q9CPR6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt88Q9CPR6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt88Q9CPR6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Krt88Q9CPR6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.69■□□□□ 0.74
Krt88Q9CPR6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt88Q9CPR6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt88Q9CPR6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.69■□□□□ 0.74
Krt88Q9CPR6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt88Q9CPR6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt88Q9CPR6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt88Q9CPR6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Krt88Q9CPR6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Krt88Q9CPR6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Krt88Q9CPR6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt88Q9CPR6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt88Q9CPR6 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.67■□□□□ 0.74
Krt88Q9CPR6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt88Q9CPR6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt88Q9CPR6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Krt88Q9CPR6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt88Q9CPR6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt88Q9CPR6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt88Q9CPR6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Krt88Q9CPR6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Krt88Q9CPR6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt88Q9CPR6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt88Q9CPR6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt88Q9CPR6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Krt88Q9CPR6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.65■□□□□ 0.74
Krt88Q9CPR6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Krt88Q9CPR6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Krt88Q9CPR6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Krt88Q9CPR6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Krt88Q9CPR6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.64■□□□□ 0.73
Krt88Q9CPR6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.64■□□□□ 0.73
Krt88Q9CPR6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt88Q9CPR6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt88Q9CPR6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt88Q9CPR6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Krt88Q9CPR6 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.63■□□□□ 0.73
Krt88Q9CPR6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt88Q9CPR6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt88Q9CPR6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Krt88Q9CPR6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt88Q9CPR6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Krt88Q9CPR6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Krt88Q9CPR6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt88Q9CPR6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt88Q9CPR6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt88Q9CPR6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Krt88Q9CPR6 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.59■□□□□ 0.73
Krt88Q9CPR6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Krt88Q9CPR6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt88Q9CPR6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt88Q9CPR6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Krt88Q9CPR6 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.58■□□□□ 0.72
Krt88Q9CPR6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.58■□□□□ 0.72
Krt88Q9CPR6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Krt88Q9CPR6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms