Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Trim34aQ99PP6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim34aQ99PP6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC27.37■■□□□ 1.97
Trim34aQ99PP6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.36■■□□□ 1.97
Trim34aQ99PP6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC27.36■■□□□ 1.97
Trim34aQ99PP6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim34aQ99PP6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim34aQ99PP6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim34aQ99PP6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Trim34aQ99PP6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim34aQ99PP6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Trim34aQ99PP6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim34aQ99PP6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Trim34aQ99PP6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trim34aQ99PP6 Gm16464-201ENSMUST00000117815 1095 ntBASIC27.34■■□□□ 1.97
Trim34aQ99PP6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Trim34aQ99PP6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.34■■□□□ 1.97
Trim34aQ99PP6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Trim34aQ99PP6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Trim34aQ99PP6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Trim34aQ99PP6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Trim34aQ99PP6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Trim34aQ99PP6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trim34aQ99PP6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.32■■□□□ 1.96
Trim34aQ99PP6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Trim34aQ99PP6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trim34aQ99PP6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim34aQ99PP6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim34aQ99PP6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim34aQ99PP6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Trim34aQ99PP6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
Trim34aQ99PP6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Trim34aQ99PP6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.3■■□□□ 1.96
Trim34aQ99PP6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC27.3■■□□□ 1.96
Trim34aQ99PP6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Trim34aQ99PP6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.29■■□□□ 1.96
Trim34aQ99PP6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Trim34aQ99PP6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Trim34aQ99PP6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC27.29■■□□□ 1.96
Trim34aQ99PP6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC27.29■■□□□ 1.96
Trim34aQ99PP6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Trim34aQ99PP6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Trim34aQ99PP6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Trim34aQ99PP6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC27.28■■□□□ 1.96
Trim34aQ99PP6 Gm5131-201ENSMUST00000212776 1238 ntBASIC27.28■■□□□ 1.96
Trim34aQ99PP6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Trim34aQ99PP6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Trim34aQ99PP6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Trim34aQ99PP6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.27■■□□□ 1.96
Trim34aQ99PP6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
Trim34aQ99PP6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trim34aQ99PP6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trim34aQ99PP6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.27■■□□□ 1.96
Trim34aQ99PP6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trim34aQ99PP6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Trim34aQ99PP6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
Trim34aQ99PP6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC27.26■■□□□ 1.95
Trim34aQ99PP6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Trim34aQ99PP6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Trim34aQ99PP6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trim34aQ99PP6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC27.25■■□□□ 1.95
Trim34aQ99PP6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC27.25■■□□□ 1.95
Trim34aQ99PP6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trim34aQ99PP6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim34aQ99PP6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim34aQ99PP6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim34aQ99PP6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Trim34aQ99PP6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC27.24■■□□□ 1.95
Trim34aQ99PP6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Trim34aQ99PP6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Trim34aQ99PP6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trim34aQ99PP6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trim34aQ99PP6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC27.22■■□□□ 1.95
Trim34aQ99PP6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC27.22■■□□□ 1.95
Trim34aQ99PP6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC27.22■■□□□ 1.95
Trim34aQ99PP6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trim34aQ99PP6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Trim34aQ99PP6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim34aQ99PP6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC27.21■■□□□ 1.95
Trim34aQ99PP6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim34aQ99PP6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim34aQ99PP6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim34aQ99PP6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Trim34aQ99PP6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Trim34aQ99PP6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Trim34aQ99PP6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC27.2■■□□□ 1.94
Trim34aQ99PP6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Trim34aQ99PP6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC27.2■■□□□ 1.94
Trim34aQ99PP6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Trim34aQ99PP6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Trim34aQ99PP6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Trim34aQ99PP6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Trim34aQ99PP6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Trim34aQ99PP6 Gm28536-201ENSMUST00000190971 1317 ntBASIC27.18■■□□□ 1.94
Trim34aQ99PP6 Gm7417-201ENSMUST00000192950 473 ntBASIC27.18■■□□□ 1.94
Trim34aQ99PP6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC27.18■■□□□ 1.94
Trim34aQ99PP6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim34aQ99PP6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim34aQ99PP6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trim34aQ99PP6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.17■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms