Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rfc4Q99J62 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rfc4Q99J62 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rfc4Q99J62 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Rfc4Q99J62 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rfc4Q99J62 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rfc4Q99J62 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rfc4Q99J62 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.52■■□□□ 1.68
Rfc4Q99J62 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.52■■□□□ 1.68
Rfc4Q99J62 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rfc4Q99J62 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rfc4Q99J62 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rfc4Q99J62 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.51■■□□□ 1.67
Rfc4Q99J62 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rfc4Q99J62 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rfc4Q99J62 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rfc4Q99J62 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.5■■□□□ 1.67
Rfc4Q99J62 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rfc4Q99J62 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.49■■□□□ 1.67
Rfc4Q99J62 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Rfc4Q99J62 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.49■■□□□ 1.67
Rfc4Q99J62 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rfc4Q99J62 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rfc4Q99J62 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rfc4Q99J62 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.48■■□□□ 1.67
Rfc4Q99J62 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rfc4Q99J62 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rfc4Q99J62 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rfc4Q99J62 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rfc4Q99J62 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.46■■□□□ 1.67
Rfc4Q99J62 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rfc4Q99J62 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Rfc4Q99J62 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Rfc4Q99J62 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rfc4Q99J62 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC25.45■■□□□ 1.66
Rfc4Q99J62 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rfc4Q99J62 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rfc4Q99J62 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rfc4Q99J62 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rfc4Q99J62 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rfc4Q99J62 Gm7417-201ENSMUST00000192950 473 ntBASIC25.44■■□□□ 1.66
Rfc4Q99J62 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rfc4Q99J62 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rfc4Q99J62 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rfc4Q99J62 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rfc4Q99J62 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rfc4Q99J62 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rfc4Q99J62 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.43■■□□□ 1.66
Rfc4Q99J62 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rfc4Q99J62 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rfc4Q99J62 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.42■■□□□ 1.66
Rfc4Q99J62 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.42■■□□□ 1.66
Rfc4Q99J62 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rfc4Q99J62 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rfc4Q99J62 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rfc4Q99J62 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
Rfc4Q99J62 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.41■■□□□ 1.66
Rfc4Q99J62 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rfc4Q99J62 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rfc4Q99J62 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rfc4Q99J62 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rfc4Q99J62 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.4■■□□□ 1.66
Rfc4Q99J62 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.4■■□□□ 1.66
Rfc4Q99J62 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rfc4Q99J62 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Rfc4Q99J62 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rfc4Q99J62 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rfc4Q99J62 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rfc4Q99J62 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
Rfc4Q99J62 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Rfc4Q99J62 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.38■■□□□ 1.65
Rfc4Q99J62 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rfc4Q99J62 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rfc4Q99J62 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rfc4Q99J62 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.36■■□□□ 1.65
Rfc4Q99J62 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rfc4Q99J62 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rfc4Q99J62 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Rfc4Q99J62 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rfc4Q99J62 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rfc4Q99J62 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rfc4Q99J62 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.35■■□□□ 1.65
Rfc4Q99J62 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Rfc4Q99J62 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rfc4Q99J62 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Rfc4Q99J62 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.34■■□□□ 1.65
Rfc4Q99J62 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rfc4Q99J62 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rfc4Q99J62 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rfc4Q99J62 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Rfc4Q99J62 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rfc4Q99J62 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms