Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb20Q91XZ9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb20Q91XZ9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb20Q91XZ9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb20Q91XZ9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb20Q91XZ9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb20Q91XZ9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb20Q91XZ9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb20Q91XZ9 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.02■□□□□ 0.96
Pcdhb20Q91XZ9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Pcdhb20Q91XZ9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb20Q91XZ9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.01■□□□□ 0.95
Pcdhb20Q91XZ9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.01■□□□□ 0.95
Pcdhb20Q91XZ9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhb20Q91XZ9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb20Q91XZ9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb20Q91XZ9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb20Q91XZ9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb20Q91XZ9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb20Q91XZ9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdhb20Q91XZ9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb20Q91XZ9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb20Q91XZ9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb20Q91XZ9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb20Q91XZ9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb20Q91XZ9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.96■□□□□ 0.95
Pcdhb20Q91XZ9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb20Q91XZ9 Gm45444-201ENSMUST00000211394 898 ntBASIC20.96■□□□□ 0.95
Pcdhb20Q91XZ9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb20Q91XZ9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb20Q91XZ9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb20Q91XZ9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb20Q91XZ9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb20Q91XZ9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb20Q91XZ9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb20Q91XZ9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdhb20Q91XZ9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdhb20Q91XZ9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb20Q91XZ9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb20Q91XZ9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb20Q91XZ9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhb20Q91XZ9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhb20Q91XZ9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb20Q91XZ9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Pcdhb20Q91XZ9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb20Q91XZ9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb20Q91XZ9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb20Q91XZ9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb20Q91XZ9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdhb20Q91XZ9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhb20Q91XZ9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb20Q91XZ9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb20Q91XZ9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Gm43566-201ENSMUST00000196851 808 ntBASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb20Q91XZ9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb20Q91XZ9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhb20Q91XZ9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb20Q91XZ9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb20Q91XZ9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb20Q91XZ9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb20Q91XZ9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb20Q91XZ9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb20Q91XZ9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.89■□□□□ 0.94
Pcdhb20Q91XZ9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb20Q91XZ9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhb20Q91XZ9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb20Q91XZ9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb20Q91XZ9 Gm5812-201ENSMUST00000061073 957 ntBASIC20.88■□□□□ 0.93
Pcdhb20Q91XZ9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb20Q91XZ9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhb20Q91XZ9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhb20Q91XZ9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Pcdhb20Q91XZ9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms